CDS

Accession Number TCMCG035C42234
gbkey CDS
Protein Id XP_021602227.1
Location join(159000..159409,161386..161507,162330..162387,163119..163193,163292..163366,163439..163486,163623..163691,163794..164597,164682..164730,166052..166329,166431..166610,173099..173159)
Gene LOC110607434
GeneID 110607434
Organism Manihot esculenta

Protein

Length 742aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA394209
db_source XM_021746535.1
Definition serrate RNA effector molecule-like isoform X1 [Manihot esculenta]

EGGNOG-MAPPER Annotation

COG_category A
Description Serrate RNA effector
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000381        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005846        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010267        [VIEW IN EMBL-EBI]
GO:0010445        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031053        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034518        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048509        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000011        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGAAGTCATCAACATGCCCGTTGATTCTCTGGACCGCCGCAGCCGCGAACGCAAGGACAAGTCATCTGCCGACGACCCCCAATCGTCCTCTCCGCCACCACCTCCTCCGCCGCAGAATATCTCTCGACGACGCGACAGAGACTCCAGAGATAGAGAGCTCGACAGGCCGCCAAATCGACGCGGCGTTGATTATTATGATAGGAATCGGTCTCCCCCGCCAAGAGAGAGGGAGCGAGACTACAAGAGGAGGAACAGTTTAAGTCCTCCTCCCGTACCATACAGGGACAGGAGGCATTCCCCGCCACCGAGGAGGTCACCCCCGTATAAGAGGTCGAGGAGGGAAGATGGAGGGTATGAAGGGAGGAGAGGGAGCCCTAGAGGTGGATTTGGACCCGGCGATAGAAGGTTTGGATATGACTATGCTGGTGGGTATGAACGTGAGATGGGGGGTAGGCCTGGATTTCCTGAAGAGCGGCCTCATGGCCGGTACATGGGTCGTGCAGGTGGATATCAAAGTGGTCCCTCTGACTGGGATTCTGGACGTGGTGGTTATGTTGATTCTTCCAACACAGTGAGTACTCAAAGAGAAGGCTTGATGTCATACAAGCAATTCATTCAGGAGCTTGAAGATGATATTCTACCAGCTGAGGCGGAGCGCAGATATCAAGAATACAAGTCAGAGTACATTTCTACTCAGAAACGAGTTTTCTTTGAGGCTCATAAAGATGAAGAATGGTTGAGAGACAAATATCATCCAACCAATTTGGTTTCAGTCGTAGAAAGGAGAAATGAATTGGCACGGAAGGTTGCAAAAGACTTTTTGCTTGACTTGCAAAGTGGAACCTTGGACTTAGGTCCTGGTATCAATGTCCCATCTGCAAATAAATCAGGACAGACAAGTGATCCAAATTCTGATGATGAAGTAGACAGTGGAGGTAAAAGAAGACGGCATGGCCGTACACAAGCTAAAGAAACTGATATTCTCTCAGCTGCTCCTAAGGCTCATCCAGTAAGCTCAGAACCCAGAAGAATTCAAATTGATGTTGAACAAGCTCAGGCCCTTGTGCGTAAGCTTGACTCTGAAAAAGGAATTGAAGAAAATATTTTAGGTGGATCTGATAATGACAAAATCAATAGAGAGAAATCTCATAGCAGCTCCACCGGCCCTGTTATCATTATACGAGGCTTAACCTCTGTCAAAGGCCTGGAGGGCGTTGAACTATTGGATACACTTATCACTTATCTTTGGCGGGTCCACAGTTTGGATTATTATGGATTGGTCGAAACCAATGAAGCTAAGGGTCTTAGGCATGTGAGAGCAGAGGGGAAAAATGCTGATGCAACTGATAGTGGGAATGAGTGGGAAAAGAAACTGGACTCACATTGGCAAGAAAGGTTGAGGAGTCAAGATCCTTTTGAATTAATGACTGCAAAGGAAAAGATAGATGCTGCTGCTGTTGAATCCTTGGATCCTTATGTCCGAAAGATTAGGGACGAAAAATATGGTTGGAAGTATGGCTGTGGAGCCAAGGGTTGCACAAAGCTCTTTCATGCTGCTGAATTTGTGCACAAGCATCTTAAACTGAAACACCCTGAACTTGTGATGGAGCTGACATCCAAAGTGCGGGAAGAGTTGTATTTCCAGAACTATATGAGTGATCCAGATGCACCTGGTGGCACACCTGTTATGCAACAGCCTTTACAGAAAGAGAAGCCACAGAGACGCAAGCTAGGTCCAGAAAATCGCTTGAAGGATGAACGAGGTGGCCGCAGAGACCGTGACAGTAGAGCAAATGGCAGTGAAAGATTCGATAGGTCTGAAAACCAACAGTCAGGTGACTTTCAGTCCAACAATGATGTTCCTGAAGGAGGGAATCATGATGATCCAATGTATGATAATTTTGGTGCACAAGGCATGCGAGTGCCTCCTTTCCCATCAGATATACCTCCACCACCAGTATTGATGCCTGTACCTGGTGCTGGCCCATTAGGTCCTTTTGTTCCTGCTCCACCTGAAGTTGCAATGCGGATGTTCAGAGAGCAGGGTGGCCCCCCTCCATTTGAAGGTGGTGGCAGAAGTGGAAGGCCTGGGCCTCAGTTAAGTGGACCAGCACCTATTCTTCTATCTCCAGCTTTTCGACAGGATCCTCGGCGAATACGCAGCTATCAAGATCTAGATGCACCAGAGGATGAAGTCACTGTTATAGATTACAGGAGTTTGTAG
Protein:  
MAEVINMPVDSLDRRSRERKDKSSADDPQSSSPPPPPPPQNISRRRDRDSRDRELDRPPNRRGVDYYDRNRSPPPRERERDYKRRNSLSPPPVPYRDRRHSPPPRRSPPYKRSRREDGGYEGRRGSPRGGFGPGDRRFGYDYAGGYEREMGGRPGFPEERPHGRYMGRAGGYQSGPSDWDSGRGGYVDSSNTVSTQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFEAHKDEEWLRDKYHPTNLVSVVERRNELARKVAKDFLLDLQSGTLDLGPGINVPSANKSGQTSDPNSDDEVDSGGKRRRHGRTQAKETDILSAAPKAHPVSSEPRRIQIDVEQAQALVRKLDSEKGIEENILGGSDNDKINREKSHSSSTGPVIIIRGLTSVKGLEGVELLDTLITYLWRVHSLDYYGLVETNEAKGLRHVRAEGKNADATDSGNEWEKKLDSHWQERLRSQDPFELMTAKEKIDAAAVESLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMELTSKVREELYFQNYMSDPDAPGGTPVMQQPLQKEKPQRRKLGPENRLKDERGGRRDRDSRANGSERFDRSENQQSGDFQSNNDVPEGGNHDDPMYDNFGAQGMRVPPFPSDIPPPPVLMPVPGAGPLGPFVPAPPEVAMRMFREQGGPPPFEGGGRSGRPGPQLSGPAPILLSPAFRQDPRRIRSYQDLDAPEDEVTVIDYRSL